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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs6989537 chr8:112739722 C/T KRT6C chr12:52862300-52867569:- 0.84 10.9 4.89E-15 Box Plot
ACC rs7001185 chr8:102021650 G/C PRHOXNB chr13:28552243-28562774:- 0.51 7.51 7.57E-10 Box Plot
ACC rs700424 chr2:16896283 G/T TFDP3 chrX:132350697-132352376:- -0.91 -7.52 7.42E-10 Box Plot
ACC rs7006187 chr8:112809290 T/C KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs7006187 chr8:112809290 T/C KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot
ACC rs7017388 chr8:112841630 T/C KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot
ACC rs7017388 chr8:112841630 T/C KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs7027616 chr9:96559179 G/A PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs7028931 chr9:96544422 T/C PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs7029054 chr9:5929167 T/C DSC1 chr18:28709199-28742819:- -0.91 -8.68 1.1E-11 Box Plot
ACC rs7032227 chr9:96558004 A/G PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs7040295 chr9:96561810 G/C PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs7083932 chr10:61383034 C/T GAGE2D chrX:49207160-49214420:+ 0.59 8.42 2.77E-11 Box Plot
ACC rs70993099 chr6:15177838 C/CA PRHOXNB chr13:28552243-28562774:- 0.59 7.64 4.7E-10 Box Plot
ACC rs713202 chr15:34147172 C/T GAGE2D chrX:49207160-49214420:+ 0.73 9.01 3.35E-12 Box Plot